Remove Python from public release workflow

data-setup/run_data_setup.sh

@@ -7,7 +7,6 @@ Usage: bash data-setup/run_data_setup.sh
 
 Optional maintenance modes:
   --dry-run        check setup scripts only
-  --download-only  download source files where scriptable
   --build-test     rebuild inputs from existing local sources
   --compare        compare regenerated inputs with committed data/
 EOF
@@ -23,7 +22,7 @@ repo_root="$(cd "$(dirname "${BASH_SOURCE[0]}")/.." && pwd -P)"
 cd "$repo_root"
 
 case "$MODE" in
-  --dry-run|--download-only|--build-test|--compare|--full-test) ;;
+  --dry-run|--build-test|--compare|--full-test) ;;
   *)
     usage
     exit 1
@@ -41,36 +40,20 @@ if [ "$MODE" = "--dry-run" ]; then
   echo "Checking data-setup scripts only; no downloads and no rebuild."
   command -v bash >/dev/null
   command -v Rscript >/dev/null
-  command -v python3 >/dev/null
   bash -n data-setup/check_raw_data.sh
-  python3 -m py_compile data-setup/download_sources.py
-  python3 -m py_compile data-setup/compare_generated_inputs.py
   Rscript -e 'files <- list.files("data-setup/R", pattern="\\.R$", full.names=TRUE); invisible(lapply(files, parse)); cat("R setup scripts parse OK\n")'
   echo "Data setup dry run passed."
   exit 0
 fi
 
-if [ "$MODE" = "--download-only" ]; then
-  python3 data-setup/download_sources.py
-  exit 0
-fi
-
 if [ "$MODE" = "--compare" ]; then
-  python3 data-setup/compare_generated_inputs.py
+  Rscript data-setup/R/03_compare_generated_inputs.R
   exit 0
 fi
 
-if [ "$MODE" = "--full-test" ]; then
-  python3 data-setup/download_sources.py || true
-fi
-
 bash data-setup/check_raw_data.sh
 rm -rf "$PARTY2D_BUILD_DIR" "$PARTY2D_GENERATED_INPUT_DIR"
 mkdir -p "$PARTY2D_BUILD_DIR" "$PARTY2D_GENERATED_INPUT_DIR"
 Rscript data-setup/R/00_install_dependencies.R
 Rscript data-setup/R/02_build_model_inputs.R
-if [ "$MODE" = "--full-test" ]; then
-  python3 data-setup/compare_generated_inputs.py || true
-else
-  python3 data-setup/compare_generated_inputs.py
-fi
+Rscript data-setup/R/03_compare_generated_inputs.R